Stem-loop cpo-mir-107

Accession

MI0038620

Description

Cavia porcellus cpo-mir-107 precursor miRNA

Sequence

AGCUUCUUUACAGUGUUGCCUUGuggcauggagaucaAGCAGCAUUGUACAGGGCUAUCA
((((.((.(((((((((((.(((............)))))))))))))).))))))....

Structure

----    U  U           C   uggca 
    AGCU CU UACAGUGUUGC UUG     u
    |||| || ||||||||||| |||      
    UCGG GA AUGUUACGACG Aac     g
ACUA    -  C           -   uagag 

Annotation confidence Not enough data

Genome context

DS562870.1: 2118337-2118396 [-]

Mature cpo-miR-107-5p

• Accession: MIMAT0046959
• Description: Cavia porcellus cpo-miR-107-5p mature miRNA
• Sequence: 1 - AGCUUCUUUACAGUGUUGCCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-107-3p

• Accession: MIMAT0046960
• Description: Cavia porcellus cpo-miR-107-3p mature miRNA
• Sequence: 38 - AGCAGCAUUGUACAGGGCUAUCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344