Stem-loop cpo-mir-99a

Accession

MI0038610

Description

Cavia porcellus cpo-mir-99a precursor miRNA

Sequence

AACCCGUAGAUCCGAUCUUGUGguaaaguggacggcaCAAGCUCGCUUCUAUGGGUCUG
.(((((((((..(((.((((((.............)))))).)))..)))))))))...

Structure

--A         UC   U      guaaa 
   ACCCGUAGA  CGA CUUGUG     g
   |||||||||  ||| ||||||     u
   UGGGUAUCU  GCU GAACac     g
GUC         UC   C      ggcag 

Annotation confidence Not enough data

Genome context

DS562889.1: 6525110-6525168 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-99a

Mature cpo-miR-99a-5p

• Accession: MIMAT0046941
• Description: Cavia porcellus cpo-miR-99a-5p mature miRNA
• Sequence: 1 - AACCCGUAGAUCCGAUCUUGUG - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-99a-3p

• Accession: MIMAT0046942
• Description: Cavia porcellus cpo-miR-99a-3p mature miRNA
• Sequence: 38 - CAAGCUCGCUUCUAUGGGUCUG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344