Stem-loop cpo-mir-34b

Accession

MI0038601

Description

Cavia porcellus cpo-mir-34b precursor miRNA

Sequence

AGGCAGUGUAAUUAGCUGAUUGUgcuguugugcuuacAAUCACUAACUCCACUGCCAUC
.(((((((...((((.(((((((((......))..)))))))))))...)))))))...

Structure

--A       UAA    C       --  ug 
   GGCAGUG   UUAG UGAUUGU  gc  u
   |||||||   |||| |||||||  ||   
   CCGUCAC   AAUC ACUAAca  cg  u
CUA       CUC    -       uu  ug 

Annotation confidence Not enough data

Genome context

DS562874.1: 36239766-36239824 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-34b

Mature cpo-miR-34b-5p

• Accession: MIMAT0046924
• Description: Cavia porcellus cpo-miR-34b-5p mature miRNA
• Sequence: 1 - AGGCAGUGUAAUUAGCUGAUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-34b-3p

• Accession: MIMAT0046925
• Description: Cavia porcellus cpo-miR-34b-3p mature miRNA
• Sequence: 38 - AAUCACUAACUCCACUGCCAUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344