Stem-loop cpo-mir-30c-1

Accession

MI0038592

Description

Cavia porcellus cpo-mir-30c-1 precursor miRNA

Sequence

UGUAAACAUCCUACACUCUCAGCUgugagcucgagguagCUGGGAGAGGGCUGUUUACUCC
.(((((((.(((...((((((((((...........)))))))))).))).)))))))...

Structure

--U       U   ACA          ugag 
   GUAAACA CCU   CUCUCAGCUg    c
   ||||||| |||   ||||||||||    u
   CAUUUGU GGG   GAGGGUCgau    c
CCU       C   --A          ggag 

Annotation confidence Not enough data

Genome context

DS563035.1: 170974-171034 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-30c-1

Mature cpo-miR-30c-5p

• Accession: MIMAT0046907
• Description: Cavia porcellus cpo-miR-30c-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUACACUCUCAGCU - 24
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-30c-3p

• Accession: MIMAT0046908
• Description: Cavia porcellus cpo-miR-30c-3p mature miRNA
• Sequence: 40 - CUGGGAGAGGGCUGUUUACUCC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344