Stem-loop cpo-mir-30b

Accession

MI0038591

Description

Cavia porcellus cpo-mir-30b precursor miRNA

Sequence

UGUAAACAUCCUACACUCAGCUguaauauaugaauuggCUGGGAGGUGGGUGUUUACUUC
.(((((((.(((((.((((((((............))))))))..))))))))))))...

Structure

--U       U     -A        uaaua 
   GUAAACA CCUAC  CUCAGCUg     u
   ||||||| |||||  ||||||||      
   CAUUUGU GGGUG  GGGUCggu     a
CUU       -     GA        uaagu 

Annotation confidence Not enough data

Genome context

DS562906.1: 2026508-2026567 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-30b

Mature cpo-miR-30b-5p

• Accession: MIMAT0046905
• Description: Cavia porcellus cpo-miR-30b-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUACACUCAGCU - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-30b-3p

• Accession: MIMAT0046906
• Description: Cavia porcellus cpo-miR-30b-3p mature miRNA
• Sequence: 39 - CUGGGAGGUGGGUGUUUACUUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344