Stem-loop cpo-mir-29b-2

Accession

MI0038588

Description

Cavia porcellus cpo-mir-29b-2 precursor miRNA

Sequence

CUGGUUUCACAUGGUGGCUUAGAuuuuucgaucuuuguaucUAGCACCAUUUGAAAUCAGUGUU
(((((((((.((((((.((.((((..............)))))))))))).)))))))))....

Structure

----         C      G  U    uuuucg 
    CUGGUUUCA AUGGUG CU AGAu      a
    ||||||||| |||||| || ||||       
    GACUAAAGU UACCAC GA Ucua      u
UUGU         U      -  -    uguuuc 

Annotation confidence Not enough data

Genome context

DS562867.1: 15329414-15329477 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-29b-2

Mature cpo-miR-29b-3p

• Accession: MIMAT0046899
• Description: Cavia porcellus cpo-miR-29b-3p mature miRNA
• Sequence: 42 - UAGCACCAUUUGAAAUCAGUGUU - 64
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-29b-2-5p

• Accession: MIMAT0046900
• Description: Cavia porcellus cpo-miR-29b-2-5p mature miRNA
• Sequence: 1 - CUGGUUUCACAUGGUGGCUUAGA - 23
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344