Stem-loop cpo-mir-29a

Accession

MI0038586

Description

Cavia porcellus cpo-mir-29a precursor miRNA

Sequence

ACUGAUUUCUUUUGGUGUUCAGAgucaauauaauuuucUAGCACCAUCUGAAAUCGGUUA
(((((((((...(((((((.((((...........)))))))))))...)))))))))..

Structure

--         UUU       C    ucaa 
  ACUGAUUUC   UGGUGUU AGAg    u
  |||||||||   ||||||| ||||    a
  UGGCUAAAG   ACCACGA Ucuu    u
AU         UCU       -    uuaa 

Annotation confidence Not enough data

Genome context

DS562899.1: 12026143-12026202 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-29a

Mature cpo-miR-29a-5p

• Accession: MIMAT0046896
• Description: Cavia porcellus cpo-miR-29a-5p mature miRNA
• Sequence: 1 - ACUGAUUUCUUUUGGUGUUCAGA - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-29a-3p

• Accession: MIMAT0046897
• Description: Cavia porcellus cpo-miR-29a-3p mature miRNA
• Sequence: 39 - UAGCACCAUCUGAAAUCGGUUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344