Stem-loop cpo-mir-28

Accession

MI0038585

Description

Cavia porcellus cpo-mir-28 precursor miRNA

Sequence

AAGGAGCUCACAGUCUAUUGAGuuacuuuuaagacuuuccCACUAGAUUGGGAGCUCCUGGA
.((((((((.(((((((.((((((........))))....)).))))))).))))))))...

Structure

--A        A       U  ----    acu 
   AGGAGCUC CAGUCUA UG    AGuu   u
   |||||||| ||||||| ||    ||||    
   UCCUCGAG GUUAGAU AC    ucag   u
AGG        G       C  ccuu    aau 

Annotation confidence Not enough data

Genome context

DS562862.1: 53348173-53348234 [+]

Mature cpo-miR-28-5p

• Accession: MIMAT0046894
• Description: Cavia porcellus cpo-miR-28-5p mature miRNA
• Sequence: 1 - AAGGAGCUCACAGUCUAUUGAG - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-28-3p

• Accession: MIMAT0046895
• Description: Cavia porcellus cpo-miR-28-3p mature miRNA
• Sequence: 41 - CACUAGAUUGGGAGCUCCUGGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344