Stem-loop cpo-mir-23a

Accession

MI0038575

Description

Cavia porcellus cpo-mir-23a precursor miRNA

Sequence

GGGGUUCCUGGGGAUGGGAUUUgcugucugucacaaAUCACAUUGCCAGGGAUUUCCAA
(((((((((((.((((.((((((.((.....)))))))).)))).)))))))))))...

Structure

---           G    G      c  u 
   GGGGUUCCUGG GAUG GAUUUg ug c
   ||||||||||| |||| |||||| || u
   CUUUAGGGACC UUAC CUAaac ac g
AAC           G    A      -  u 

Annotation confidence Not enough data

Genome context

DS562897.1: 12931646-12931704 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpo-mir-23a

Mature cpo-miR-23a-5p

• Accession: MIMAT0046876
• Description: Cavia porcellus cpo-miR-23a-5p mature miRNA
• Sequence: 1 - GGGGUUCCUGGGGAUGGGAUUU - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-23a-3p

• Accession: MIMAT0046877
• Description: Cavia porcellus cpo-miR-23a-3p mature miRNA
• Sequence: 37 - AUCACAUUGCCAGGGAUUUCCAA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344