Stem-loop cpo-mir-15a

Accession

MI0038561

Description

Cavia porcellus cpo-mir-15a precursor miRNA

Sequence

UAGCAGCACAUAAUGGUUUGUGgauuuugaaaaggugCAGGCCAUAUUGUGCUGCCUCAaaaauacaa
..((((((((..((((((((((.............))))))))))..)))))))).............

Structure

-----------UA        UA          gauuu 
             GCAGCACA  AUGGUUUGUG     u
             ||||||||  ||||||||||     g
             CGUCGUGU  UACCGGACgu     a
aacauaaaaACUC        UA          ggaaa 

Annotation confidence Not enough data

Genome context

DS562861.1: 59875526-59875593 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-15a

Mature cpo-miR-15a-5p

• Accession: MIMAT0046849
• Description: Cavia porcellus cpo-miR-15a-5p mature miRNA
• Sequence: 1 - UAGCAGCACAUAAUGGUUUGUG - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-15a-3p

• Accession: MIMAT0046850
• Description: Cavia porcellus cpo-miR-15a-3p mature miRNA
• Sequence: 38 - CAGGCCAUAUUGUGCUGCCUCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344