Stem-loop cpo-let-7a-2

Accession

MI0038541

Description

Cavia porcellus cpo-let-7a-2 precursor miRNA

Sequence

UGAGGUAGUAGGUUGUAUAGUUuagaauuacaucaagggagauaaCUGUACAGCCUCCUAGCUUUCC
.(((.(((.(((((((((((((.........(((......)))))))))))))))).))).)))...

Structure

--U   G   U             uagaauuac   aa 
   GAG UAG AGGUUGUAUAGUU         auc  g
   ||| ||| |||||||||||||         |||   
   UUC AUC UCCGACAUGUCaa         uag  g
CCU   G   C             ---------   ag 

Annotation confidence Not enough data

Genome context

DS562874.1: 26138016-26138082 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-let-7a-2

Mature cpo-let-7a-5p

• Accession: MIMAT0046817
• Description: Cavia porcellus cpo-let-7a-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-let-7a-2-3p

• Accession: MIMAT0046819
• Description: Cavia porcellus cpo-let-7a-2-3p mature miRNA
• Sequence: 46 - CUGUACAGCCUCCUAGCUUUCC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344