Stem-loop bta-mir-12057

Accession

MI0038490

Description

Bos taurus bta-mir-12057 precursor miRNA

Sequence

467 reads, 1.0 reads per million, 137 experiments

ACUGGGAGUGGAAGGAGAGCCcagagguuuccagggacugguccUGACCUCUCCCUUCCCUCCCCAcag
...(((((.((((((((((..(((.((...((((...)))))))))..)))).))))))))))).....

Structure

--ACU     U      -    CC   a  uuu    g 
     GGGAG GGAAGG AGAG  cag gg   ccag  
     ||||| |||||| ||||  ||| ||   |||| g
     CCCUC CCUUCC UCUC  GUc cu   gguc  
gacAC     -      C    CA   -  ---    a 

Annotation confidence Medium

Genome context

18: 50042578-50042646 [+]

Mature bta-miR-12057-5p

• Accession: MIMAT0046764
• Description: Bos taurus bta-miR-12057-5p mature miRNA
• Sequence: 1 - ACUGGGAGUGGAAGGAGAGCC - 21
• Evidence: experimental ; Illumina [1]

Mature bta-miR-12057-3p

• Accession: MIMAT0051198
• Description: Bos taurus bta-miR-12057-3p mature miRNA
• Sequence: 45 - UGACCUCUCCCUUCCCUCCCCA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26519053
   Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
   Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
   BMC Genomics (2015) 16:884