miRBase entry: bta-mir-1949

Stem-loop bta-mir-1949


Accession
MI0038481
Description
Bos taurus bta-mir-1949 precursor miRNA

Literature search
1 open access papers mention bta-mir-1949
(2 sentences)

Sequence

20 reads, 78 reads per million, 15 experiments
cugguuggcauucugggccugguucaugccuacucuguuauuaacUAUACCAGGAUGCCAGCAUAGUU
((((((((((((((((...(((((.(((.(......).))).)))))..))))))))))))).)))..

Structure
--   -             gcc     c   c ua 
  cug guuggcauucugg   ugguu aug c  c
  ||| |||||||||||||   ||||| ||| |   
  GAU CGACCGUAGGACC   AUcaa uau g  u
UU   A             -AU     u   u uc 


Annotation confidence Not enough data
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Genome context
chr7: 52406413-52406480 [+]

Database links

Mature bta-miR-1949

Accession MIMAT0046755
Description Bos taurus bta-miR-1949 mature miRNA
Sequence 46 - UAUACCAGGAUGCCAGCAUAGUU - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26519053
    Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
    Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
    BMC Genomics (2015) 16:884