Stem-loop bta-mir-3065

Accession

MI0038467

Description

Bos taurus bta-mir-3065 precursor miRNA

Literature search

6 open access papers mention bta-mir-3065
(45 sentences)

Sequence

18036 reads, 16.0 reads per million, 138 experiments

ucAACAAAAUCACUGAUGCUGGAGuugcgugugucaucACUCAGCACCAGGAUAUUGUUgggg
(((((((.(((.(((.(((((.(((...(((...))).)))))))).)))))).)))))))..

Structure

--       A   A   A     G   ugc   u 
  ucAACAA AUC CUG UGCUG AGu   gug  
  ||||||| ||| ||| ||||| |||   ||| g
  ggUUGUU UAG GAC ACGAC UCA   uac  
gg       A   -   C     -   --c   u 

Annotation confidence Medium

Genome context

19: 51569631-51569693 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-3065

Mature bta-miR-3065-5p

• Accession: MIMAT0046741
• Description: Bos taurus bta-miR-3065-5p mature miRNA
• Sequence: 3 - AACAAAAUCACUGAUGCUGGAG - 24
• Evidence: experimental ; Illumina [1]

Mature bta-miR-3065-3p

• Accession: MIMAT0051189
• Description: Bos taurus bta-miR-3065-3p mature miRNA
• Sequence: 39 - ACUCAGCACCAGGAUAUUGUU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26519053
   Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
   Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
   BMC Genomics (2015) 16:884