Stem-loop bta-mir-12005-1

Accession

MI0038390

Description

Bos taurus bta-mir-12005-1 precursor miRNA

Sequence

1088 reads, 1.0 reads per million, 168 experiments

CUCCCCUUAAGGACUUCAUAUUuaaauaucauauucUAUGAAGUCCUUAAGGGGAGGGU
((((((((((((((((((((................))))))))))))))))))))...

Structure

---                    UUuaaau 
   CUCCCCUUAAGGACUUCAUA       a
   ||||||||||||||||||||        
   GAGGGGAAUUCCUGAAGUAU       u
UGG                    cuuauac 

Annotation confidence High

Genome context

5: 38144440-38144498 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-12005-1

Mature bta-miR-12005-1-5p

• Accession: MIMAT0051150
• Description: Bos taurus bta-miR-12005-1-5p mature miRNA
• Sequence: 1 - CUCCCCUUAAGGACUUCAUAUU - 22
• Evidence: experimental ; Illumina [1]

Mature bta-miR-12005-3p

• Accession: MIMAT0046666
• Description: Bos taurus bta-miR-12005-3p mature miRNA
• Sequence: 37 - UAUGAAGUCCUUAAGGGGAGGGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26519053
   Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
   Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
   BMC Genomics (2015) 16:884