miRBase entry: bta-mir-12004

Stem-loop bta-mir-12004


Accession
MI0038388
Description
Bos taurus bta-mir-12004 precursor miRNA


Sequence

61 reads, 15 reads per million, 22 experiments
CUGGCUCUGGCUCUCUGCCUCCUccuaaccggagggacagagagccagggcc
..(((((((((((((((.(.(((((.....)))))).)))))))))))))))

Structure
CU               C U     u 
  GGCUCUGGCUCUCUG C CCUcc a
  ||||||||||||||| | ||||| a
  ccgggaccgagagac g ggagg c
--               a -     c 


Annotation confidence Not enough data
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Genome context
chr20: 31888442-31888493 [+]

Database links

Mature bta-miR-12004

Accession MIMAT0046664
Description Bos taurus bta-miR-12004 mature miRNA
Sequence 1 - CUGGCUCUGGCUCUCUGCCUCCU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26519053
    Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
    Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
    BMC Genomics (2015) 16:884