miRBase entry: bta-mir-11997

Stem-loop bta-mir-11997


Accession
MI0038377
Description
Bos taurus bta-mir-11997 precursor miRNA


Sequence

2041 reads, 3.0 reads per million, 214 experiments
UCACCCACACCUUUGCUGUccaaagaucccacauucaauucuggugaccguauaucuuccaaagcuaaAACCAAGGGUGUGGGCCGAGA
...((((((((((((((.....(((((...((..(((.......)))..))..)))))....))).......)))))))))))......

Structure
---UCA           -------   GUcca     ccc  au   au 
      CCCACACCUUU       GCU     aagau   ac  uca  u
      |||||||||||       |||     |||||   ||  |||  c
      GGGUGUGGGAA       cga     uucua   ug  agu  u
AGAGCC           CCAAaau   -aacc     -ua  cc   gg 


Annotation confidence High
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Genome context
21: 27713492-27713580 [+]

Database links

Mature bta-miR-11997-5p

Accession MIMAT0051142
Description Bos taurus bta-miR-11997-5p mature miRNA
Sequence 1 - UCACCCACACCUUUGCUGU - 19
Evidence experimental
Illumina [1]

Mature bta-miR-11997-3p

Accession MIMAT0046653
Description Bos taurus bta-miR-11997-3p mature miRNA
Sequence 69 - AACCAAGGGUGUGGGCCGAGA - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26519053
    Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
    Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
    BMC Genomics (2015) 16:884