Stem-loop pte-mir-11968-1

Accession

MI0038155

Description

Parasteatoda tepidariorum pte-mir-11968-1 precursor miRNA

Sequence

AGGGACAUUGACUAGCAAGCUGuuguuauguuuuauacccaGCUUUCUGGUAAUAGUCUCCCU
(((((.(((((((((.((((((.(((........)))..)))))).)))))..)))).)))))

Structure

     C    --     C      -u   uau 
AGGGA AUUG  ACUAG AAGCUG  ugu   g
||||| ||||  ||||| ||||||  |||    
UCCCU UGAU  UGGUC UUCGac  aua   u
     C    AA     U      cc   uuu 

Annotation confidence Not enough data

Genome context

Scf5bK3_75: 1317191-1317253 [-]

Mature pte-miR-11968-5p

• Accession: MIMAT0046330
• Description: Parasteatoda tepidariorum pte-miR-11968-5p mature miRNA
• Sequence: 1 - AGGGACAUUGACUAGCAAGCUG - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11968-3p

• Accession: MIMAT0046331
• Description: Parasteatoda tepidariorum pte-miR-11968-3p mature miRNA
• Sequence: 42 - GCUUUCUGGUAAUAGUCUCCCU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144