Stem-loop pte-mir-11965-2

Accession

MI0038152

Description

Parasteatoda tepidariorum pte-mir-11965-2 precursor miRNA

Sequence

GAUGAAGGAAUUUGUGUUCAUaguuacauaUGAACACAAAUUCCUUCAUCUC
((((((((((((((((((((((......))))))))))))))))))))))..

Structure

--                      gu 
  GAUGAAGGAAUUUGUGUUCAUa  u
  ||||||||||||||||||||||   
  CUACUUCCUUAAACACAAGUau  a
CU                      ac 

Annotation confidence Not enough data

Genome context

Scf5bK3_401: 1568889-1568940 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pte-mir-11965-2

Mature pte-miR-11965-3p

• Accession: MIMAT0046317
• Description: Parasteatoda tepidariorum pte-miR-11965-3p mature miRNA
• Sequence: 31 - UGAACACAAAUUCCUUCAUCUC - 52
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11965-2-5p

• Accession: MIMAT0046325
• Description: Parasteatoda tepidariorum pte-miR-11965-2-5p mature miRNA
• Sequence: 1 - GAUGAAGGAAUUUGUGUUCAU - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144