Stem-loop pte-mir-11965-1

Accession

MI0038151

Description

Parasteatoda tepidariorum pte-mir-11965-1 precursor miRNA

Sequence

GAUAAAGGAAUUUUUGUUCAUAuguaaauaUGAACACAAAUUCCUUCAUCUC
(((.(((((((((.(((((((((....))))))))).))))))))).)))..

Structure

--   A         U         g 
  GAU AAGGAAUUU UGUUCAUAu u
  ||| ||||||||| |||||||||  
  CUA UUCCUUAAA ACAAGUaua a
CU   C         C         a 

Annotation confidence Not enough data

Genome context

Scf5bK3_401: 1572416-1572467 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pte-mir-11965-1

Mature pte-miR-11965-3p

• Accession: MIMAT0046317
• Description: Parasteatoda tepidariorum pte-miR-11965-3p mature miRNA
• Sequence: 31 - UGAACACAAAUUCCUUCAUCUC - 52
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11965-5p

• Accession: MIMAT0046324
• Description: Parasteatoda tepidariorum pte-miR-11965-5p mature miRNA
• Sequence: 1 - GAUAAAGGAAUUUUUGUUCAUA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144