Stem-loop pte-mir-11962b

Accession

MI0038145

Description

Parasteatoda tepidariorum pte-mir-11962b precursor miRNA

Sequence

CAUAUUUCAAAAAUGGCAUCACgucuugcuaauaucuGAUGCCAUUUUUGAGCUAUGUA
((((.((((((((((((((((...............)))))))))))))))).))))..

Structure

--    U                Cgucuu 
  CAUA UUCAAAAAUGGCAUCA      g
  |||| ||||||||||||||||      c
  GUAU GAGUUUUUACCGUAGu      u
AU    C                cuauaa 

Annotation confidence Not enough data

Genome context

Scf5bK3_265: 10550016-10550074 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pte-mir-11962b

Mature pte-miR-11962b-5p

• Accession: MIMAT0046314
• Description: Parasteatoda tepidariorum pte-miR-11962b-5p mature miRNA
• Sequence: 1 - CAUAUUUCAAAAAUGGCAUCAC - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11962b-3p

• Accession: MIMAT0046315
• Description: Parasteatoda tepidariorum pte-miR-11962b-3p mature miRNA
• Sequence: 38 - GAUGCCAUUUUUGAGCUAUGUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144