Stem-loop pte-mir-11962a

Accession

MI0038144

Description

Parasteatoda tepidariorum pte-mir-11962a precursor miRNA

Sequence

CAUAUUUCAGAAAUGGCAUCAAguaauuuucacaacuGAUGUCAUUUUUGAAGUAUGCA
(((((((((((((((((((((.((..........)))))))))))))))))))))))..

Structure

--                     A  aauu 
  CAUAUUUCAGAAAUGGCAUCA gu    u
  ||||||||||||||||||||| ||     
  GUAUGAAGUUUUUACUGUAGu ca    u
AC                     -  acac 

Annotation confidence Not enough data

Genome context

Scf5bK3_265: 10546954-10547012 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pte-mir-11962a

Mature pte-miR-11962a-5p

• Accession: MIMAT0046312
• Description: Parasteatoda tepidariorum pte-miR-11962a-5p mature miRNA
• Sequence: 1 - CAUAUUUCAGAAAUGGCAUCAA - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11962a-3p

• Accession: MIMAT0046313
• Description: Parasteatoda tepidariorum pte-miR-11962a-3p mature miRNA
• Sequence: 38 - GAUGUCAUUUUUGAAGUAUGCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144