Stem-loop pte-mir-11960

Accession

MI0038140

Description

Parasteatoda tepidariorum pte-mir-11960 precursor miRNA

Literature search

1 open access papers mention pte-mir-11960
(2 sentences)

Sequence

AUGGUAAAUUGUUCACUCAGAUagcaauCUGCGUGAACAAUUUCCCAUGC
((((.(((((((((((.(((((....))))).))))))))))).))))..

Structure

--    U           U     a 
  AUGG AAAUUGUUCAC CAGAU g
  |||| ||||||||||| |||||  
  UACC UUUAACAAGUG GUCua c
CG    C           C     a 

Annotation confidence Not enough data

Genome context

Scf5bK3_112: 1037640-1037689 [-]

Mature pte-miR-11960-5p

• Accession: MIMAT0046304
• Description: Parasteatoda tepidariorum pte-miR-11960-5p mature miRNA
• Sequence: 1 - AUGGUAAAUUGUUCACUCAGAU - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11960-3p

• Accession: MIMAT0046305
• Description: Parasteatoda tepidariorum pte-miR-11960-3p mature miRNA
• Sequence: 29 - CUGCGUGAACAAUUUCCCAUGC - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144