Stem-loop pte-mir-11947b-2

Accession

MI0038135

Description

Parasteatoda tepidariorum pte-mir-11947b-2 precursor miRNA

Sequence

ACAUUCCUAGCAUGUUGGUUAgcgucauagcuaaaUCAGCAUGGUAGGAAUGUAUUU
(((((((((.(((((((((((((......))).)))))))))).)))))))))....

Structure

----         G          -   gu 
    ACAUUCCUA CAUGUUGGUU Agc  c
    ||||||||| |||||||||| |||   
    UGUAAGGAU GUACGACUaa ucg  a
UUUA         G          a   au 

Annotation confidence Not enough data

Genome context

Scf5bK3_44: 6393863-6393919 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pte-mir-11947b-2

Mature pte-miR-11947b-5p

• Accession: MIMAT0046296
• Description: Parasteatoda tepidariorum pte-miR-11947b-5p mature miRNA
• Sequence: 1 - ACAUUCCUAGCAUGUUGGUUA - 21
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11947b-3p

• Accession: MIMAT0046297
• Description: Parasteatoda tepidariorum pte-miR-11947b-3p mature miRNA
• Sequence: 36 - UCAGCAUGGUAGGAAUGUAUUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144