Stem-loop pte-mir-11953

Accession

MI0038130

Description

Parasteatoda tepidariorum pte-mir-11953 precursor miRNA

Sequence

UUCUGUUCAGUGUUAGUCUGAGAuguuaguuUUAGCUUUCACUGAAUGGCAGC
..((((((((((..((.(((((((....)))))))))..))))))))))....

Structure

--UU          UU  U       g 
    CUGUUCAGUG  AG CUGAGAu u
    ||||||||||  || |||||||  
    GGUAAGUCAC  UC GAUUuug u
CGAC          UU  -       a 

Annotation confidence Not enough data

Genome context

Scf5bK3_962: 1724287-1724339 [+]

Mature pte-miR-11953-5p

• Accession: MIMAT0046288
• Description: Parasteatoda tepidariorum pte-miR-11953-5p mature miRNA
• Sequence: 1 - UUCUGUUCAGUGUUAGUCUGAGA - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11953-3p

• Accession: MIMAT0046289
• Description: Parasteatoda tepidariorum pte-miR-11953-3p mature miRNA
• Sequence: 32 - UUAGCUUUCACUGAAUGGCAGC - 53
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144