Stem-loop pte-mir-3477

Accession

MI0038129

Description

Parasteatoda tepidariorum pte-mir-3477 precursor miRNA

Literature search

1 open access papers mention pte-mir-3477
(3 sentences)

Sequence

UAAUCUCAUUCGGUAUGGACUGAugaauguuuauaaaaCAGUCGUACCAUAUGAGAUAUC
..(((((((..((((((.((((((((....))))....))))))))))..)))))))...

Structure

-UA       UC      G    ----    a 
   AUCUCAU  GGUAUG ACUG    Auga u
   |||||||  |||||| ||||    ||||  
   UAGAGUA  CCAUGC UGAC    uauu g
CUA       UA      -    aaaa    u 

Annotation confidence Not enough data

Genome context

Scf5bK3_133: 1228367-1228426 [+]

Mature pte-miR-3477-5p

• Accession: MIMAT0046286
• Description: Parasteatoda tepidariorum pte-miR-3477-5p mature miRNA
• Sequence: 1 - UAAUCUCAUUCGGUAUGGACUGA - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-3477-3p

• Accession: MIMAT0046287
• Description: Parasteatoda tepidariorum pte-miR-3477-3p mature miRNA
• Sequence: 39 - CAGUCGUACCAUAUGAGAUAUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144