miRBase entry: pte-mir-11952

Stem-loop pte-mir-11952


Accession
MI0038128
Description
Parasteatoda tepidariorum pte-mir-11952 precursor miRNA


Sequence

GCAAUAUCGGGUUUGAACGCUGCuugcuagauaaguguguAACGUUAACACCGAUAUUGCCC
(((((((((((((..((((.(((..(((.....)))..))).))))))).))))))))))..

Structure
--          -   UG    C   uu   a 
  GCAAUAUCGG GUU  AACG UGC  gcu g
  |||||||||| |||  |||| |||  ||| a
  CGUUAUAGCC CAA  UUGC Aug  uga u
CC          A   --    A   ug   a 


Annotation confidence Not enough data
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Genome context
Scf5bK3_230: 1499973-1500034 [+]

Database links

Mature pte-miR-11952-5p

Accession MIMAT0046284
Description Parasteatoda tepidariorum pte-miR-11952-5p mature miRNA
Sequence 1 - GCAAUAUCGGGUUUGAACGCUGC - 23
Evidence experimental
Illumina [1]

Mature pte-miR-11952-3p

Accession MIMAT0046285
Description Parasteatoda tepidariorum pte-miR-11952-3p mature miRNA
Sequence 41 - AACGUUAACACCGAUAUUGCCC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144