Stem-loop pte-mir-11951b

Accession

MI0038127

Description

Parasteatoda tepidariorum pte-mir-11951b precursor miRNA

Literature search

1 open access papers mention pte-mir-11951b
(1 sentences)

Sequence

AAAGCUCUUGGGAAACAAUGUUguaagaguuaacaaaCAUUUUAUCUCGAGGGCUUAUG
.((((((((((((...((((((((........)).))))))...))))))))))))...

Structure

--A            AAC      -  aag 
   AAGCUCUUGGGA   AAUGUU gu   a
   ||||||||||||   |||||| ||    
   UUCGGGAGCUCU   UUACaa ca   g
GUA            AUU      a  auu 

Annotation confidence Not enough data

Genome context

Scf5bK3_537.1: 13305839-13305897 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pte-mir-11951b

Mature pte-miR-11951b-5p

• Accession: MIMAT0046282
• Description: Parasteatoda tepidariorum pte-miR-11951b-5p mature miRNA
• Sequence: 1 - AAAGCUCUUGGGAAACAAUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11951b-3p

• Accession: MIMAT0046283
• Description: Parasteatoda tepidariorum pte-miR-11951b-3p mature miRNA
• Sequence: 38 - CAUUUUAUCUCGAGGGCUUAUG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144