Stem-loop pte-mir-11950

Accession

MI0038125

Description

Parasteatoda tepidariorum pte-mir-11950 precursor miRNA

Sequence

AGGCAAAGCUCCUCUUCAGUAAAuuaucaugauuuUACCGGGAGGUACUUGGCUUAA
((((.(((..((((((..(((((..........))))).))))))..))).))))..

Structure

--    A   CU      CA     uuau 
  AGGC AAG  CCUCUU  GUAAA    c
  |||| |||  ||||||  |||||     
  UUCG UUC  GGAGGG  CAUuu    a
AA    G   AU      -C     uagu 

Annotation confidence Not enough data

Genome context

Scf5bK3_786: 6403352-6403408 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from pte-mir-11950

Mature pte-miR-11950-5p

• Accession: MIMAT0046278
• Description: Parasteatoda tepidariorum pte-miR-11950-5p mature miRNA
• Sequence: 1 - AGGCAAAGCUCCUCUUCAGUAAA - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11950-3p

• Accession: MIMAT0046279
• Description: Parasteatoda tepidariorum pte-miR-11950-3p mature miRNA
• Sequence: 36 - UACCGGGAGGUACUUGGCUUAA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144