Stem-loop pte-mir-11946

Accession

MI0038120

Description

Parasteatoda tepidariorum pte-mir-11946 precursor miRNA

Sequence

UGCCACACUGAAGAUUUUACUGacuaauuugcugCGUGAACUCAUUCAGUGUGGCAUG
((((((((((((((.(((((..((......).)..))))).)).))))))))))))..

Structure

--            -  U     UG - ua 
  UGCCACACUGAA GA UUUAC  a c  a
  |||||||||||| || |||||  | |   
  ACGGUGUGACUU CU AAGUG  u g  u
GU            A  C     Cg c uu 

Annotation confidence Not enough data

Genome context

Scf5bK3_332: 4028663-4028720 [-]

Mature pte-miR-11946-5p

• Accession: MIMAT0046270
• Description: Parasteatoda tepidariorum pte-miR-11946-5p mature miRNA
• Sequence: 1 - UGCCACACUGAAGAUUUUACUG - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11946-3p

• Accession: MIMAT0046271
• Description: Parasteatoda tepidariorum pte-miR-11946-3p mature miRNA
• Sequence: 35 - CGUGAACUCAUUCAGUGUGGCAUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144