Stem-loop pte-mir-11945

Accession

MI0038119

Description

Parasteatoda tepidariorum pte-mir-11945 precursor miRNA

Sequence

AGCAACAUAUUCACUGGACGGCugauccauuccucaacCAUCCAGUAGAUAUGUUGCUCGC
(((((((((((.((((((.((.(((........))).)).)))))).)))))))))))...

Structure

---           C      C  C   ucc 
   AGCAACAUAUU ACUGGA GG uga   a
   ||||||||||| |||||| || |||    
   UCGUUGUAUAG UGACCU Cc acu   u
CGC           A      A  a   ccu 

Annotation confidence Not enough data

Genome context

Scf5bK3_524: 1134778-1134838 [-]

Mature pte-miR-11945-5p

• Accession: MIMAT0046268
• Description: Parasteatoda tepidariorum pte-miR-11945-5p mature miRNA
• Sequence: 1 - AGCAACAUAUUCACUGGACGGC - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11945-3p

• Accession: MIMAT0046269
• Description: Parasteatoda tepidariorum pte-miR-11945-3p mature miRNA
• Sequence: 39 - CAUCCAGUAGAUAUGUUGCUCGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144