Stem-loop pte-mir-11944

Accession

MI0038118

Description

Parasteatoda tepidariorum pte-mir-11944 precursor miRNA

Sequence

CCUCGAACUCUACAUGGCGCCAauacuuucagauauuGGCGCCAUGUAGUGUUCGCGGAC
((.(((((.((((((((((((((((........)))))))))))))))).))))).))..

Structure

--  U     U                cuu 
  CC CGAAC CUACAUGGCGCCAaua   u
  || ||||| ||||||||||||||||    
  GG GCUUG GAUGUACCGCGGuuau   c
CA  C     U                aga 

Annotation confidence Not enough data

Genome context

Scf5bK3_265: 5658206-5658265 [+]

Mature pte-miR-11944-5p

• Accession: MIMAT0046266
• Description: Parasteatoda tepidariorum pte-miR-11944-5p mature miRNA
• Sequence: 1 - CCUCGAACUCUACAUGGCGCCA - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11944-3p

• Accession: MIMAT0046267
• Description: Parasteatoda tepidariorum pte-miR-11944-3p mature miRNA
• Sequence: 38 - GGCGCCAUGUAGUGUUCGCGGAC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144