Stem-loop pte-mir-11942b

Accession

MI0038113

Description

Parasteatoda tepidariorum pte-mir-11942b precursor miRNA

Literature search

1 open access papers mention pte-mir-11942b
(2 sentences)

Sequence

UGCUAAGACUGUCAGUGUUUGGugaauuuuauuucAAACACUGGCAGUCUUGAUGG
...(((((((((((((((((((...........)))))))))))))))))))....

Structure

-UGC                   ugaa 
    UAAGACUGUCAGUGUUUGG    u
    |||||||||||||||||||    u
    GUUCUGACGGUCACAAAcu    u
GGUA                   uuau 

Annotation confidence Not enough data

Genome context

Scf5bK3_265: 1038429-1038484 [+]

Mature pte-miR-11942b-5p

• Accession: MIMAT0046256
• Description: Parasteatoda tepidariorum pte-miR-11942b-5p mature miRNA
• Sequence: 1 - UGCUAAGACUGUCAGUGUUUGG - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11942b-3p

• Accession: MIMAT0046257
• Description: Parasteatoda tepidariorum pte-miR-11942b-3p mature miRNA
• Sequence: 36 - AAACACUGGCAGUCUUGAUGG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144