Stem-loop pte-mir-11942a

Accession

MI0038112

Description

Parasteatoda tepidariorum pte-mir-11942a precursor miRNA

Literature search

1 open access papers mention pte-mir-11942a
(2 sentences)

Sequence

CGUUAAGACUGUCAGUGUUUGGCuguguuauauuuucugcCAAAUACUGACAGUCUUACCAA
.(.((((((((((((((((((((...............)))))))))))))))))))).)..

Structure

-C U                    uguguu 
  G UAAGACUGUCAGUGUUUGGC      a
  | ||||||||||||||||||||      u
  C AUUCUGACAGUCAUAAACcg      a
AA C                    ucuuuu 

Annotation confidence Low

Genome context

Scf5bK3_165.1: 1758563-1758624 [-]

Mature pte-miR-11942a-5p

• Accession: MIMAT0046254
• Description: Parasteatoda tepidariorum pte-miR-11942a-5p mature miRNA
• Sequence: 1 - CGUUAAGACUGUCAGUGUUUGGC - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11942a-3p

• Accession: MIMAT0046255
• Description: Parasteatoda tepidariorum pte-miR-11942a-3p mature miRNA
• Sequence: 41 - CAAAUACUGACAGUCUUACCAA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144