Stem-loop pte-mir-11940

Accession

MI0038110

Description

Parasteatoda tepidariorum pte-mir-11940 precursor miRNA

Sequence

UCCGUCACUGUUACUACUGCUaaccuaacguuauUAGAAAGUAAUAGUGGCAAGU
...((((((((((((.(((.((((.....)))).)))..))))))))))))....

Structure

-UCC            -A   C    c 
    GUCACUGUUACU  CUG Uaac u
    ||||||||||||  ||| |||| a
    CGGUGAUAAUGA  GAU auug a
UGAA            AA   u    c 

Annotation confidence Not enough data

Genome context

Scf5bK3_44: 82126-82180 [+]

Mature pte-miR-11940-5p

• Accession: MIMAT0046250
• Description: Parasteatoda tepidariorum pte-miR-11940-5p mature miRNA
• Sequence: 1 - UCCGUCACUGUUACUACUGCU - 21
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11940-3p

• Accession: MIMAT0046251
• Description: Parasteatoda tepidariorum pte-miR-11940-3p mature miRNA
• Sequence: 35 - UAGAAAGUAAUAGUGGCAAGU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144