Stem-loop pte-mir-11939

Accession

MI0038109

Description

Parasteatoda tepidariorum pte-mir-11939 precursor miRNA

Sequence

UGUUGCUUCAUAUGAUCUAAAGUACUuaaaagucuuaagUACUAGAUUAUGAAGCAGCAGA
((((((((((((..((((..(((((((((.....)))))))))))))))))))))))))..

Structure

--            UG    AA         a 
  UGUUGCUUCAUA  AUCU  AGUACUuaa a
  ||||||||||||  ||||  ||||||||| g
  ACGACGAAGUAU  UAGA  UCAUgaauu u
AG            --    --         c 

Annotation confidence Not enough data

Genome context

Scf5bK3_32: 835993-836053 [+]

Mature pte-miR-11939-5p

• Accession: MIMAT0046248
• Description: Parasteatoda tepidariorum pte-miR-11939-5p mature miRNA
• Sequence: 1 - UGUUGCUUCAUAUGAUCUAAAGUACU - 26
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11939-3p

• Accession: MIMAT0046249
• Description: Parasteatoda tepidariorum pte-miR-11939-3p mature miRNA
• Sequence: 40 - UACUAGAUUAUGAAGCAGCAGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144