Stem-loop pte-mir-993a

Accession

MI0038106

Description

Parasteatoda tepidariorum pte-mir-993a precursor miRNA

Literature search

2 open access papers mention pte-mir-993a
(2 sentences)

Sequence

GGGACCUGUAGAAUCGGGCUACUguguguuuaacaauucaGAAGCUCGUCUCUACAGGAACGU
.(..((((((((..((((((.(((.((........)).))).))))))..))))))))..)..

Structure

-G GA        AU      A   u  guu 
  G  CCUGUAGA  CGGGCU CUg gu   u
  |  ||||||||  |||||| ||| ||    
  C  GGACAUCU  GCUCGA Gac ua   a
UG AA        CU      A   u  aca 

Annotation confidence Not enough data

Genome context

Scf5bK3_142: 3107379-3107441 [+]

Mature pte-miR-993a-5p

• Accession: MIMAT0046243
• Description: Parasteatoda tepidariorum pte-miR-993a-5p mature miRNA
• Sequence: 1 - GGGACCUGUAGAAUCGGGCUACU - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-993a-3p

• Accession: MIMAT0046244
• Description: Parasteatoda tepidariorum pte-miR-993a-3p mature miRNA
• Sequence: 41 - GAAGCUCGUCUCUACAGGAACGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144