miRBase entry: pte-mir-92a

Stem-loop pte-mir-92a


Accession
MI0038100
Description
Parasteatoda tepidariorum pte-mir-92a precursor miRNA

Literature search
1 open access papers mention pte-mir-92a
(1 sentences)

Sequence

AGGUCGGGGUGAUUGGCAGUAUUguauaugaugcaacuaaUAUUGCACUCGUCCCGGCCUAA
((((((((((((...((((((((((((...)))))....)))))))..))))))))))))..

Structure
--            UUG       ----     a 
  AGGUCGGGGUGA   GCAGUAU    Uguau  
  ||||||||||||   |||||||    ||||| u
  UCCGGCCCUGCU   CGUUAUa    acgua  
AA            -CA       auca     g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Scf5bK3_416: 86062-86123 [-]

Database links

Mature pte-miR-92a-5p

Accession MIMAT0046233
Description Parasteatoda tepidariorum pte-miR-92a-5p mature miRNA
Sequence 1 - AGGUCGGGGUGAUUGGCAGUAUU - 23
Evidence experimental
Illumina [1]

Mature pte-miR-92a-3p

Accession MIMAT0046234
Description Parasteatoda tepidariorum pte-miR-92a-3p mature miRNA
Sequence 41 - UAUUGCACUCGUCCCGGCCUAA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144