Stem-loop pte-mir-87c

Accession

MI0038098

Description

Parasteatoda tepidariorum pte-mir-87c precursor miRNA

Sequence

GAACCUGAAAUUUUGUCUCAGCCggauauuuuaaacugUUGAGCAAAGUUUCAGGUGUAU
..(((((((((((((.((((((.(...........).)))))))))))))))))))....

Structure

--GA             U      C gaua 
    ACCUGAAAUUUUG CUCAGC g    u
    ||||||||||||| |||||| |    u
    UGGACUUUGAAAC GAGUUg c    u
UAUG             -      u aaau 

Annotation confidence Not enough data

Genome context

Scf5bK3_290: 2040734-2040793 [-]

Mature pte-miR-87c-5p

• Accession: MIMAT0046229
• Description: Parasteatoda tepidariorum pte-miR-87c-5p mature miRNA
• Sequence: 1 - GAACCUGAAAUUUUGUCUCAGCC - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-87c-3p

• Accession: MIMAT0046230
• Description: Parasteatoda tepidariorum pte-miR-87c-3p mature miRNA
• Sequence: 39 - UUGAGCAAAGUUUCAGGUGUAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144