miRBase entry: pte-mir-87c

Stem-loop pte-mir-87c


Accession
MI0038098
Description
Parasteatoda tepidariorum pte-mir-87c precursor miRNA


Sequence

GAACCUGAAAUUUUGUCUCAGCCggauauuuuaaacugUUGAGCAAAGUUUCAGGUGUAU
..(((((((((((((.((((((.(...........).)))))))))))))))))))....

Structure
--GA             U      C gaua 
    ACCUGAAAUUUUG CUCAGC g    u
    ||||||||||||| |||||| |    u
    UGGACUUUGAAAC GAGUUg c    u
UAUG             -      u aaau 


Annotation confidence Not enough data
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Genome context
Scf5bK3_290: 2040734-2040793 [-]

Database links

Mature pte-miR-87c-5p

Accession MIMAT0046229
Description Parasteatoda tepidariorum pte-miR-87c-5p mature miRNA
Sequence 1 - GAACCUGAAAUUUUGUCUCAGCC - 23
Evidence experimental
Illumina [1]

Mature pte-miR-87c-3p

Accession MIMAT0046230
Description Parasteatoda tepidariorum pte-miR-87c-3p mature miRNA
Sequence 39 - UUGAGCAAAGUUUCAGGUGUAU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144