Stem-loop pte-mir-87a

Accession

MI0038096

Description

Parasteatoda tepidariorum pte-mir-87a precursor miRNA

Sequence

CCACCUGAAAAUUUGUCUCAACCUcgucauucaaaauagGUGAGCAAAGUUUCAGGUGCCU
.(((((((((.((((.((((.(((.((........))))))))))))).)))))))))...

Structure

--C         A    U    A   c  cau 
   CACCUGAAA UUUG CUCA CCU gu   u
   ||||||||| |||| |||| ||| ||    
   GUGGACUUU AAAC GAGU Gga ua   c
UCC         G    -    -   -  aaa 

Annotation confidence Not enough data

Genome context

Scf5bK3_2865: 1396953-1397013 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pte-mir-87a

Mature pte-miR-87a-5p

• Accession: MIMAT0046225
• Description: Parasteatoda tepidariorum pte-miR-87a-5p mature miRNA
• Sequence: 1 - CCACCUGAAAAUUUGUCUCAACCU - 24
• Evidence: experimental ; Illumina [1]

Mature pte-miR-87a-3p

• Accession: MIMAT0046226
• Description: Parasteatoda tepidariorum pte-miR-87a-3p mature miRNA
• Sequence: 40 - GUGAGCAAAGUUUCAGGUGCCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144