Stem-loop pte-mir-71-2

Accession

MI0038093

Description

Parasteatoda tepidariorum pte-mir-71-2 precursor miRNA

Literature search

2 open access papers mention pte-mir-71-2
(14 sentences)

Sequence

UGAAAGACAUGGGUAGUGAGAUGuguguaaauaguuucaUCUCACUACCUUGUCUUUGACG
..(((((((.(((((((((((((..............))))))))))))))))))))....

Structure

--UG       U             ugugua 
    AAAGACA GGGUAGUGAGAUG      a
    ||||||| |||||||||||||       
    UUUCUGU UCCAUCACUCUac      a
GCAG       -             uuugau 

Annotation confidence Not enough data

Genome context

Scf5bK3_595: 731101-731161 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from pte-mir-71-2

Mature pte-miR-71-5p

• Accession: MIMAT0046219
• Description: Parasteatoda tepidariorum pte-miR-71-5p mature miRNA
• Sequence: 1 - UGAAAGACAUGGGUAGUGAGAUG - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-71-3p

• Accession: MIMAT0046220
• Description: Parasteatoda tepidariorum pte-miR-71-3p mature miRNA
• Sequence: 40 - UCUCACUACCUUGUCUUUGACG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144