Stem-loop pte-mir-35o-2

Accession

MI0038086

Description

Parasteatoda tepidariorum pte-mir-35o-2 precursor miRNA

Sequence

AGCUAUUAAUGGCUCGGUGAUagaggauugcacgUCACCGGGAGGUUAAUAUGCUUU
((((((((((..(((((((((............)))))))))..))))))).)))..

Structure

--   -       GG         agagg 
  AGC UAUUAAU  CUCGGUGAU     a
  ||| |||||||  |||||||||      
  UCG AUAAUUG  GGGCCACUg     u
UU   U       GA         cacgu 

Annotation confidence Not enough data

Genome context

Scf5bK3_73: 4588710-4588766 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from pte-mir-35o-2

Mature pte-miR-35o-3p

• Accession: MIMAT0046165
• Description: Parasteatoda tepidariorum pte-miR-35o-3p mature miRNA
• Sequence: 35 - UCACCGGGAGGUUAAUAUGCUUU - 57
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35o-2-5p

• Accession: MIMAT0046211
• Description: Parasteatoda tepidariorum pte-miR-35o-2-5p mature miRNA
• Sequence: 1 - AGCUAUUAAUGGCUCGGUGAU - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144