Stem-loop pte-mir-35q-2

Accession

MI0038085

Description

Parasteatoda tepidariorum pte-mir-35q-2 precursor miRNA

Sequence

ACGAAAUAGUUUUAUCUGGUUACucaaaauuaaaauuguCACCGGAUGAACUAUUUUGGUU
.(((((((((((.(((((((.((..............)).))))))))))))))))))...

Structure

--A           U       U  ucaaaa 
   CGAAAUAGUUU AUCUGGU AC      u
   ||||||||||| ||||||| ||       
   GUUUUAUCAAG UAGGCCA ug      u
UUG           -       C  uuaaaa 

Annotation confidence Not enough data

Genome context

Scf5bK3_9832: 27-87 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pte-mir-35q-2

Mature pte-miR-35q-3p

• Accession: MIMAT0046167
• Description: Parasteatoda tepidariorum pte-miR-35q-3p mature miRNA
• Sequence: 40 - CACCGGAUGAACUAUUUUGGUU - 61
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35q-5p

• Accession: MIMAT0046210
• Description: Parasteatoda tepidariorum pte-miR-35q-5p mature miRNA
• Sequence: 1 - ACGAAAUAGUUUUAUCUGGUUAC - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144