Stem-loop pte-mir-35l

Accession

MI0038078

Description

Parasteatoda tepidariorum pte-mir-35l precursor miRNA

Sequence

AGCAAUUAAUGGCUCGGUGGCagugccucgccugACACCGGGUCGUUUAUUUGCUUU
(((((..((((((((((((.(((.((...))))).))))))))))))...)))))..

Structure

--     -UU            G   u  c 
  AGCAA   AAUGGCUCGGUG Cag gc  
  |||||   |||||||||||| ||| || u
  UCGUU   UUGCUGGGCCAC guc cg  
UU     UAU            A   -  c 

Annotation confidence Not enough data

Genome context

Scf5bK3_73: 4662657-4662713 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pte-mir-35l

Mature pte-miR-35l-5p

• Accession: MIMAT0046200
• Description: Parasteatoda tepidariorum pte-miR-35l-5p mature miRNA
• Sequence: 1 - AGCAAUUAAUGGCUCGGUGGC - 21
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35l-3p

• Accession: MIMAT0046201
• Description: Parasteatoda tepidariorum pte-miR-35l-3p mature miRNA
• Sequence: 35 - ACACCGGGUCGUUUAUUUGCUUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144