Stem-loop pte-mir-35u

Accession

MI0038074

Description

Parasteatoda tepidariorum pte-mir-35u precursor miRNA

Sequence

AGCAAUUAAUGGCUCGGUGGCagugucucgccugACACCAAGUCGUUUAUUUGCUUU
(((((..(((((((.((((.(((.((...))))).)))).)))))))...)))))..

Structure

--     -UU       C    G   u  c 
  AGCAA   AAUGGCU GGUG Cag gu  
  |||||   ||||||| |||| ||| || u
  UCGUU   UUGCUGA CCAC guc cg  
UU     UAU       A    A   -  c 

Annotation confidence Not enough data

Genome context

Scf5bK3_73: 4583750-4583806 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from pte-mir-35u

Mature pte-miR-35u-5p

• Accession: MIMAT0046194
• Description: Parasteatoda tepidariorum pte-miR-35u-5p mature miRNA
• Sequence: 1 - AGCAAUUAAUGGCUCGGUGGC - 21
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35u-3p

• Accession: MIMAT0046195
• Description: Parasteatoda tepidariorum pte-miR-35u-3p mature miRNA
• Sequence: 35 - ACACCAAGUCGUUUAUUUGCUUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144