Stem-loop pte-mir-35z

Accession

MI0038073

Description

Parasteatoda tepidariorum pte-mir-35z precursor miRNA

Sequence

AGAAUAUUUCAUACGGUUGACUUguauuuuuaaacaaaAUCAUCGUUUAAAAUAUUCAUU
.((((((((...(((((.((.((((........))))..)))))))...))))))))...

Structure

--A        CAU     U  -C    auu 
   GAAUAUUU   ACGGU GA  UUgu   u
   ||||||||   ||||| ||  ||||    
   CUUAUAAA   UGCUA CU  aaca   u
UUA        AUU     -  Aa    aau 

Annotation confidence Not enough data

Genome context

Scf5bK3_786: 6406386-6406445 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from pte-mir-35z

Mature pte-miR-35z-5p

• Accession: MIMAT0046192
• Description: Parasteatoda tepidariorum pte-miR-35z-5p mature miRNA
• Sequence: 1 - AGAAUAUUUCAUACGGUUGACUU - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35z-3p

• Accession: MIMAT0046193
• Description: Parasteatoda tepidariorum pte-miR-35z-3p mature miRNA
• Sequence: 39 - AUCAUCGUUUAAAAUAUUCAUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144