Stem-loop pte-mir-35m

Accession

MI0038072

Description

Parasteatoda tepidariorum pte-mir-35m precursor miRNA

Sequence

AGCAAUCAAUGGCUCGGUGGCagugucuugccugACACCGGGUAGUUGAUUUGCUUU
((((((((((.((((((((.(((.((...))))).)))))))).))))).)))))..

Structure

--     -     G        G   u  c 
  AGCAA UCAAU GCUCGGUG Cag gu  
  ||||| ||||| |||||||| ||| || u
  UCGUU AGUUG UGGGCCAC guc cg  
UU     U     A        A   -  u 

Annotation confidence Not enough data

Genome context

Scf5bK3_73: 4580855-4580911 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from pte-mir-35m

Mature pte-miR-35m-5p

• Accession: MIMAT0046190
• Description: Parasteatoda tepidariorum pte-miR-35m-5p mature miRNA
• Sequence: 1 - AGCAAUCAAUGGCUCGGUGGC - 21
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35m-3p

• Accession: MIMAT0046191
• Description: Parasteatoda tepidariorum pte-miR-35m-3p mature miRNA
• Sequence: 35 - ACACCGGGUAGUUGAUUUGCUUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144