Stem-loop pte-mir-35s

Accession

MI0038071

Description

Parasteatoda tepidariorum pte-mir-35s precursor miRNA

Sequence

GGUUGAAUGUUCCUGGUGUUGcauucuuuaaacuugcaUCACCGGGUAAACAUUCAUCCCC
((.(((((((((((((((.((((...........)))).)))))))..)))))))).))..

Structure

--  U        --       U    uucu 
  GG UGAAUGUU  CCUGGUG UGca    u
  || ||||||||  ||||||| ||||    u
  CC ACUUACAA  GGGCCAC acgu    a
CC  U        AU       U    ucaa 

Annotation confidence Not enough data

Genome context

Scf5bK3_238.1: 746981-747041 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pte-mir-35s

Mature pte-miR-35s-5p

• Accession: MIMAT0046188
• Description: Parasteatoda tepidariorum pte-miR-35s-5p mature miRNA
• Sequence: 1 - GGUUGAAUGUUCCUGGUGUUG - 21
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35s-3p

• Accession: MIMAT0046189
• Description: Parasteatoda tepidariorum pte-miR-35s-3p mature miRNA
• Sequence: 39 - UCACCGGGUAAACAUUCAUCCCC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144