Stem-loop pte-mir-35i

Accession

MI0038070

Description

Parasteatoda tepidariorum pte-mir-35i precursor miRNA

Sequence

CAAAAUUUUUCACCGCGGUAGUUugaauuuaaaaaUCACCGGGUGAAAAUUUUGUUU
(((((((((.((((.((((.((((........)))).)))))))))))))))))...

Structure

---         U    G    A    gaa 
   CAAAAUUUU CACC CGGU GUUu   u
   ||||||||| |||| |||| ||||    
   GUUUUAAAA GUGG GCCA Uaaa   u
UUU         -    -    C    aau 

Annotation confidence Not enough data

Genome context

Scf5bK3_786: 6405550-6405606 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from pte-mir-35i

Mature pte-miR-35i-5p

• Accession: MIMAT0046186
• Description: Parasteatoda tepidariorum pte-miR-35i-5p mature miRNA
• Sequence: 1 - CAAAAUUUUUCACCGCGGUAGUU - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35i-3p

• Accession: MIMAT0046187
• Description: Parasteatoda tepidariorum pte-miR-35i-3p mature miRNA
• Sequence: 36 - UCACCGGGUGAAAAUUUUGUUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144