Stem-loop pte-mir-35g

Accession

MI0038068

Description

Parasteatoda tepidariorum pte-mir-35g precursor miRNA

Sequence

UGAAAUUUUUCGCUGCGGUGGUUuguauauuugaaaaUCACCGGGUGAAAAGUUUGCUU
..((((((((((((.(((((((((..........)))))))))))))))))))))....

Structure

--UG            G         guau 
    AAAUUUUUCGCU CGGUGGUUu    a
    |||||||||||| |||||||||     
    UUUGAAAAGUGG GCCACUaaa    u
UUCG            -         aguu 

Annotation confidence Not enough data

Genome context

Scf5bK3_786: 6402613-6402671 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from pte-mir-35g

Mature pte-miR-35g-5p

• Accession: MIMAT0046182
• Description: Parasteatoda tepidariorum pte-miR-35g-5p mature miRNA
• Sequence: 1 - UGAAAUUUUUCGCUGCGGUGGUU - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35g-3p

• Accession: MIMAT0046183
• Description: Parasteatoda tepidariorum pte-miR-35g-3p mature miRNA
• Sequence: 38 - UCACCGGGUGAAAAGUUUGCUU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144